Hort health-related terms from the query text. Despite the fact that LDPMap is very
Though Isparities in collective efficacy as well as other indicators of social well-being resulting LDPMap is very effective in handling UMLS term queries, it has two main limitations. AL, AM, RM, and KH analyzed comparable procedures, participated within the style of your study, and revised the man.Hort medical terms from the query text. Even though LDPMap is extremely effective in handling UMLS term queries, it has two major limitations. First, it can't deal with synonyms and coreferences. Luckily, UMLS title= 1568539X-00003152 Metathesaurus normally list a concept preferred names and synonyms to ensure that LDPMap can work efficiently in most instances, though the list may well nevertheless not be comprehensive. Second, itFigure 7 Correctness comparison on LDPMap, UMLS Metathesaurus Browser, and MetaMap for Group three applying Criterion 1.Ren et al. BMC Health-related Genomics 2014, 7(Suppl 1):S11 http://www.biomedcentral.com/1755-8794/7/S1/SPage 11 ofFigure eight Correctness comparison on LDPMap and UMLS Metathesaurus Browser for Group three utilizing Criterion two.Table 3 Original terms and their randomly generated character variationsCUI Name Randomly generated four character variations POMGRAATE FRUIT EXTRdCT 150 MG Oral Casule AlbunexIectable Solution LateMa branch of dorsal ramus of ifth thoracic gpinal nerve Sinokhizrbimamericanus gp100 IL 7ISA-51/MART1 danthron 15 MGML Pantothenic Acid 25 MG/ML Oral Suspension Benzenesulfonamide, N-(( hexahydro1H- azepin-1-yl amino) carbonyl-4-methyl1-undecene1-O-beta2,3',4',6-tetraacetyl glucopyranoside C3267394 POMEGRANATE FRUIT EXTRACT 150 MG Oral Capsule C3228202 Albunex Injectable Solution C0505183 Lateral branch of dorsal ramus of fifth thoracic spinal nerve C1459293 Sinorhizobium americanus C1541607 gp100/IL-7/ISA-51/MART-1 C1352046 danthron 1.five MG/ML / Pantothenic Acid 2.five MG/ML Oral Suspension C0040372 Benzenesulfonamide, N-(((hexahydro-1H-azepin-1-yl)amino) carbonyl)-4-methylC2714409 1-undecene-1-O-beta-2',3',4',6'-tetraacetyl glucopyranosideTable 4 Query results for Table three.CUI UMLS Metathesaurus MetaMap Browser (notion ranked 1st by approximate match) C0016767 Fruit, C2346927 Mg++, and 4 other individuals C1704444 Solution (Multiplicative Product) [Quantitative Concept] C1514468 product [Entity] C1706131 Branch(Branch(group)), C2700383 Branch(Branch of plant), and six other folks No outcome C0020898 IL (Illinois (geographic location)), C1522481 MART-1 (MART-1 Tumor Antigen), and two other people C1129294 danthron 25 MG, C0439526 /mL [Quantitative Concept], and 3 other folks C0053169 benzenesulfonamide, C0441922 N+ (N+ (tumor staging)), and two other individuals C0470206 +1 [Q uantitative Concept] C1417683 BETA2 (NEUROD1 gene), and 7 other folks LDPMapC3267394 C0030054 Oxygen C3228202 C1514468 productcorrect C0086466 Injectable Item appropriate correct appropriate appropriate appropriate correctC0505183 C0007965 Chediak-Higashi Syndrome C1459293 No result C1541607 C1512807 Integrated Learning Program C1352046 C0029383 Osmium C0040372 C0265215 Meckel-Gruber syndrome C2714409 C0030011 Oxidationis not capable to carry out syntax-level processing as MetaMap does, like extracting medical terms from an write-up. No matter if it is achievable to extend the LDPMap approach to overcome the two limitations remains an open question.Inside the future we would prefer to investigate this question and strategy to work with LDPMap as an efficient pre-processing tool to map healthcare terms towards the UMLS concepts, and use the results in our understanding discovery title= 10508619.2011.638589 applications.Ren et al. BMC Medical Genomics 2014, 7(Suppl 1):S11 http://www.biomedcentral.com/1755-8794/7/S1/SPage 12 ofCompeting interests The authors declare that they have no competing interests. Authors' contributions KR implemented the LDPMap algorithm, carried out the experiments, and edited the manuscript.
